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Table 1 Sources of the ST, scRNA-seq, and bulk RNA-seq datasets

From: Single-cell analysis unveils activation of mast cells in colorectal cancer microenvironment

Deposited Data

Platform

Identifier

Human CRC ST dataset

10x Genomics

http://www.cancerdiversity.asia/scCRLM

Human CRC scRNA-seq dataset

10x Genomics

https://www.synapse.org/#!Synapse:syn26844071/

Human CRC scRNA-seq dataset

10x Genomics

GEO: GSE178341

Human CRC scRNA-seq dataset

10x Genomics

GEO: GSE164522

Human CRC bulk RNA-seq dataset

Illumina Hiseq

TCGA

Human CRC bulk RNA-seq dataset

GPL4133

GEO: GSE20842

Human CRC bulk RNA-seq dataset

GPL570

GEO: GSE20916

Human CRC bulk RNA-seq dataset

GPL570

GEO: GSE39582

Human CRC bulk RNA-seq dataset

GPL96

GEO: GSE41258

Human CRC bulk RNA-seq dataset

GPL13667

GEO: GSE44076

Human CRC bulk RNA-seq dataset

GPL3921

GEO: GSE44861

Human CRC bulk RNA-seq dataset

GPL96

GEO: GSE68468

Human CRC bulk RNA-seq dataset

GPL10558

GEO: GSE83889

Human CRC bulk RNA-seq dataset

GPL13497

GEO: GSE87211

Human CRC bulk RNA-seq dataset

GPL10558

GEO: GSE106582