Table 1 Summary of sRNAs from control and DENV-infected Aedes albopictus
From: The expression profile of Aedes albopictus miRNAs is altered by dengue virus serotype-2 infection
| Â | Control mosquitoes | Infected mosquitoes | ||
|---|---|---|---|---|
RNA class | Unique sRNAs | Total sRNAs | Unique sRNAs | Total sRNAs |
Raw reads | Â | 10931852 | Â | 21966367 |
clean reads | 1962591 (100%) | 10102019 (100%) | 5600491 (100%) | 20781374 (100%) |
Mapped to genomic | 61337 (3.13%) | 4805249 (47.57%) | 123126 (2.20%) | 3309844 (15.93%) |
Exon antisense | 20663 (1.06%) | 71989 (0.71%) | 66031 (1.18%) | 294427 (1.42%) |
Exon sense | 42862 (2.18%) | 74171 (0.73%) | 114131 (2.04%) | 255393 (1.23%) |
Intron antisense | 31838 (1.62%) | 95207 (0.94%) | 96829 (1.73%) | 353679 (1.70%) |
Intron sense | 57867 (2.95%) | 158529 (1.57%) | 172485 (3.08%) | 484486 (2.33%) |
miRNA | 1370 (0.07%) | 3944255 (39.04%) | 1284 (0.02%) | 2261930 (10.88%) |
rRNA | 44028 (2.24%) | 742412 (7.35%) | 54369 (0.97%) | 711225 (3.42%) |
Repeat | 486909 (24.81%) | 1144793 (11.33%) | 1528878 (27.30%) | 4100141 (19.73%) |
snRNA | 556 (0.03%) | 2371 (0.02%) | 627 (0.01%) | 1306 (0) |
snoRNA | 85 (0) | 165 (0) | 170 (0) | 271 (0) |
tRNA | 3270 (0.17%) | 49538 (0.49%) | 6303 (0.11%) | 58790 (0.28%) |
Unannotated sRNAs | 1273143 (64.87%) | 3818589 (37.80%) | 3559384 (63.55%) | 12259726 (58.99%) |