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Table 5 CDSs involved in flagella biosynthesis in L. hongkongensis genome

From: Transport genes and chemotaxis in Laribacter hongkongensis: a genome-wide analysis

CDS Gene Product Organism with the closest matching sequences E-value Identities Clustera
LHK_00436 flgL flagellar hook-associated protein 3 L. nitroferrum 1e-59 127/312 (40%) FA
LHK_00437 flgK flagellar hook-associated protein FlgK L. nitroferrum 1e-109 258/634 (40%) FA
LHK_00438 flgJ flagellar rod assembly protein/muramidase FlgJ L. nitroferrum 3e-68 144/296 (48%) FA
LHK_00439 flgI flagellar basal body P-ring protein C. violaceum 1e-95 197/294 (67%) FA
LHK_00440 flgH flagellar L-ring protein L. nitroferrum 4e-60 122/231 (52%) FA
LHK_00441 flgG flagellar basal-body rod protein FlgG Ralstonia pickettii 2e-92 162/260 (62%) FA
LHK_00442 flgF flagellar basal-body rod protein FlgF L. nitroferrum 1e-75 143/246 (58%) FA
LHK_00443 flgE flagellar basal body FlaE domain-containing protein Pseudomonas putida 4e-76 212/598 (35%) FA
LHK_00444 flgD flagellar hook capping protein L. nitroferrum 8e-38 88/240 (36%) FA
LHK_00445 flgC flagellar basal-body rod protein flgC C. violaceum 2e-49 92/136 (67%) FA
LHK_00446 flgB flagellar basal-body rod protein FlgB L. nitroferrum 2e-41 89/136 (65%) FA
LHK_00584 flgN FlgN family protein C. violaceum 2e-15 48/131 (36%) FB
LHK_00585 flgM anti-sigma-28 factor, FlgM L. nitroferrum 4e-09 36/59 (61%) FB
LHK_00586 flgA flagella basal body P-ring formation protein FlgA L. nitroferrum 2e-36 85/206 (41%) FB
LHK_00781 fliA RNA polymerase sigma factor for flagellar operon C. violaceum 5e-89 165/242 (68%) FC
LHK_00782 fleN flagellar synthesis regulator FleN L. nitroferrum 3e-49 121/268 (45%) FC
LHK_00783 flhF flagellar biosynthesis regulator FlhF C. violaceum 1e-119 250/504 (49%) FC
LHK_00784 flhA flagellar biosynthesis protein FlhA L. nitroferrum 0 519/682 (76%) FC
LHK_00785 flhB flagellar biosynthetic protein FlhB L. nitroferrum 2e-136 226/378 (59%) FC
LHK_02206 motB OmpA/MotB domain protein L. nitroferrum 6e-111 206/273 (75%) FD
LHK_02207 motA flagellar motor protein MotA L. nitroferrum 9e-123 213/286 (74%) FD
LHK_02348 fliR flagellar biosynthetic protein FliR L. nitroferrum 1e-60 142/258 (55%) FE
LHK_02349 fliQ flagellar biosynthetic protein FliQ L. nitroferrum 6e-24 65/89 (73%) FE
LHK_02350   GCN5-related N-acetyltransferase Methylocella silvestris 5e-09 47/150 (31%) FE
LHK_02351 fliP flagellar biosynthesis protein FliP C. violaceum 7e-95 178/252 (70%) FE
LHK_02352 fliO flagellar protein FliO C. violaceum 2e-16 52/100 (52%) FE
LHK_02353 fliN flagellar motor switch protein FliN L. nitroferrum 2e-54 111/140 (79%) FE
LHK_02354 fliM flagellar motor switch protein FliM L. nitroferrum 3e-160 272/327 (83%) FE
LHK_02355 fliL flagellar fliL transmembrane protein C. violaceum 2e-28 64/136 (47%) FE
LHK_02356 fliK flagellar hook-length control protein Nitrosomonas europaea 5e-18 41/108 (37%) FE
LHK_02357 fliJ flagellar export protein FliJ L. nitroferrum 3e-20 64/142 (45%) FE
LHK_02358 fliI flagellar protein export ATPase FliI L. nitroferrum 0 331/453 (73%) FE
LHK_02359 fliH flagellar assembly protein FliH L. nitroferrum 8e-32 109/275 (39%) FE
LHK_02360 fliG flagellar motor switch protein FliG L. nitroferrum 2e-148 261/332 (78%) FE
LHK_02361 fliF flagellar M-ring protein FliF L. nitroferrum 0 339/585 (57%) FE
LHK_02362 fliE flagellar hook-basal body complex subunit FliE L. nitroferrum 5e-27 69/110 (62%) FE
LHK_02363   two component, sigma54 specific, transcriptional regulator, Fis family L. nitroferrum 2e-143 279/450 (62%) FE
LHK_02703 fliD flagellar hook-associated 2 domain protein L. nitroferrum 5e-45 136/445 (30%) FF
LHK_02704 flaG FlaG flagellar protein Janthinobacterium sp. Marseille 2e-11 38/105 (36%) FF
LHK_02705 fliC flagellin domain-containing protein Acidovorax sp. 2e-73 159/288 (55%) FF
  1. aThe flagellar proteins were arranged in six gene clusters, FA, FB, FC, FD, FE and FF (flagellar A, B, C, D, E and F clusters)