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Fig. 3 | Cell & Bioscience

Fig. 3

From: Single-cell transcriptomic analysis of normal and pathological tissues from the same patient uncovers colon cancer progression

Fig. 3

Identification of epithelial cell clusters and their expression features. A. tSNE plot of all the epithelial, colored by different stages. B. tSNE plot of all the epithelial, colored by clusters. C. tSNE plot of all the enterocyte, colored by different stages and clusters. D. The stacked histogram shows the 4 different cell cluster compositions in 3 pathological stages. E. The bar chart shows each enterocyte cell cluster composition of 3 pathological stages. F. The expression of marker genes of the enterocyte cells in different stages. G. Expression-based pathway activities scored by GSVA per enterocyte cluster, the red color indicates enrichment and blue color indicates not enrichment. H. The Top marker gene expression and cell location of epithelial clusters by TCGA and the Human Protein Atlas. I Violin plots of Top marker gene expression in enterocyte clusters

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Cell & Bioscience

ISSN: 2045-3701

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