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Table 1 List of DR-related genes and their aberrant methylation status

From: DNA methylation in diabetic retinopathy: pathogenetic role and potential therapeutic targets

Pathogenesis

Key genes

DNA methylation status

References

Oxidative stress

PLOG1

Hypermethylation

Mishra et al. [45]

D-loop

Hypermethylation

Mishra et al. [45]

MLH1

Hypermethylation

Mohammad et al. [52]

MMP-9

Hypomethylation

Zhou et al. [54]

RAC1

Hypomethylation

Duraisamy et al. [18]

PPARα

Hypermethylation

Zhu et al. [17]

MnSOD/SOD2

Hypermethylation

Duraisamy et al. [49]

Inflammation

NLRP3, TGFβ1, MCP-1, TNFSF2

Hypomethylation

Chen et al. [62]

MALAT1

Hypomethylation

Zhu et al. [17]

Neovascularization

MEG3

Hypermethylation

He et al. [80]

ETS1, HES5, PRDM16

Unknown

Berdasco et al. [20]

Others

MTHFR

Hypermethylation

Dos Santos Nunes et al. [96]

Santana Bezerra et al. [98]

SIRT1

Hypermethylation

Mishra et al. [101]

Chen et al. [102]

  1. POLG1, polymerase gamma 1; D-loop, displacement loop; MLH1, MutL homolog 1; MMP-9, matrix metalloproteinase-9; RAC1, Ras-related C3 botulinum toxin substrate 1; PPARα, peroxisome proliferator-activated receptor alpha; MnSOD, mitochondrial superoxide dismutase; NLRP3, NOD-like receptor 3; TGFβ1, transforming growth factor beta-1; MCP-1, monocyte chemoattractant protein-1; TNFSF2, tumor necrosis factor ligand superfamily member 2; MALAT1, metastasis-associated lung adenocarcinoma transcript 1; MEG3, maternally expressed gene 3; MTHFR, methylenetetrahydrofolate reductase; SIRT1, sirtuin 1