Fig. 2
From: Single-cell analysis of mouse uterus at the invasion phase of embryo implantation
Identification of different cell types by using canonical marker genes. A The t-Stochastic neighbor embedding (tSNE) representation of single-cell RNA-seq data obtained from IS and IIS of the uterus. Single cells were grouped by cellular origin (right) and cell clusters (left). LE, luminal epithelial cells; GE, glandular epithelial cells; S1, deep stromal cells; S1p, proliferating deep stromal cells; S2, superficial stromal cells; S2, proliferating superficial stromal cells; S3, primary decidualization zone cells; SMC, smooth muscle cells; PC, pericytes; PCp, proliferating pericytes; VEC, vascular endothelial cells; VECp, proliferating vascular endothelial cells; LEC, lymphatic endothelial cells; LECp, proliferating lymphatic endothelial cells; NK, natural killer cells; NKp, proliferating natural killer cells; T, T cells; B, B cells; M, macrophages; Mp, proliferating macrophages; DC, dendritic cells; DCp, proliferating dendritic cells; pDC, plasmacytoid dendritic cells. (B-J) The expression pattern of canonical marker genes projected onto TSNE plots. Shown are pan-marker genes for hormone-responsive cells, immune cells and endothelial cells B, epithelial cells C, stromal cells D, smooth muscle cells and pericytes E, decidual cells F, proliferating cells G, endothelial cells H, lymphocytes I, and myeloid cells J. Dashed lines denote the boundaries of the cell cluster of interest