Fig. 6

Pseudotime trajectory of T cells clusters in endometriosis lesions, eutopic endometrium and normal endometrium. A, B Monocle analyses showing the development of CD4 + T cells. C Heatmap of different blocks of DEGs along the pseudotime trajectory. The full table of DEGs is shown in Additional file 12. D Functional enrichment analyses with GO and KEGG performed with the enriched genes in cells through fate 1 and fate 2. E, F Monocle analyses showing the development of CD8 + T cells. G The expression of IFNG through CD8 + T cells pseudotime trajectory. H Functional enrichment analyses with GO and KEGG were compared in characteristic subclusters of CD8 + T cells from endometriosis lesions and endometrium