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Table 2 List of pathways and biological process

From: Significant transcriptomic changes are associated with differentiation of bone marrow-derived mesenchymal stem cells into neural progenitor-like cells in the presence of bFGF and EGF

MSigDB Gene Set Number ES NES FDR
q-value
BIOCARTA_INTEGRIN_PATHWAY 19 − 0.748 − 1.978 0.004
REACTOME_CELL_CYCLE_CHECKPOINTS 160 − 0.432 − 1.698 0.039
GO_ACTIN_FILAMENT_BASED_PROCESS 435 − 0.370 − 1.613 0.048
GO_MITOTIC_CYTOKINESIS 32 − 0.525 − 1.567 0.056
GO_MICROTUBULE_CYTOSKELETON_ORGANISATION_INVOLVED_IN_MITOSIS 66 − 0.430 − 1.512 0.064
REACTOME_CELL_CYCLE 343 − 0.318 − 1.383 0.121
KEGG_CELL_CYCLE 80 − 0.357 − 1.285 0.193
GO_CELL_CYCLE_G2_M_PHASE_TRANSITION 162 − 0.315 − 1.244 0.193
  1. Reported are the terms significantly enriched (FDR < 0.25) in MSCs. ES enrichment score, NES normalised enrichment score