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Table 1 Primers, amplicon size and annealing temperature of ZnT3, Sp1 and β-actin for RT-PCR and ChIP-PCR

From: Disruption of zinc transporter ZnT3 transcriptional activity and synaptic vesicular zinc in the brain of Huntington’s disease transgenic mouse

Name

Primer sequences

Amplicon size (bp)

Annealing temperature

Forward

Reverse

β-actin

GTCGTACCACAGGCATTGTGATGG

GCAATGCCTGGGTACATGGTGG

492

58/63 °C

β-actin

TTTCCAGCCTTCCTTCTTGGGTATG

ATAGAGGTCTTTACGGATGTCAACG

100

58/63 °C

ZnT3

GGAGGTGGTTGGTGGGTATTTAGC

CCATTAGCAGATTGGCACAGACAGC

317

58 °C

Sp1

AGAACCCACAAGCCCAGACAATC

CTCCTTCTCCACCTGCTGTCTCA

330

63 °C

ZnT3 promoter -338 ~ -232(GC-1)

GTCGTACCACAGGCATTGTGATGG

GCAATGCCTGGGTACATGGTGG

106

60 °C

ZnT3 promoter -253 ~ -112(GC-2)

TTTCCAGCCTTCCTTCTTGGGTATG

ATAGAGGTCTTTACGGATGTCAACG

141

60 °C