From: RNA-seq analysis of synovial fibroblasts brings new insights into rheumatoid arthritis
Gene | Description | Chr | RAFPKM | RA2FPKM | WT2FPKM | WT2FPKM | Avg.RA | Avg.WT | Foldchange | Ensembl gene ID |
---|---|---|---|---|---|---|---|---|---|---|
IL26 | interleukin 26 solute carrier family 2 (facilitated | chr12 | 17.913 | 1.927 | 0.101 | 0.144 | 9.920 | 0.123 | 80.83 | ENSG00000111536 |
SLC2A5 | glucose/fructose transporter), member 5 | chr1 | 65.268 | 21.844 | 0.340 | 3.851 | 43.556 | 2.096 | 20.79 | ENSG00000142583 |
PLXDC2 | plexin domain containing 2 v-maf musculoaponeurotic | chr10 | 9.222 | 2.316 | 0.098 | 0.573 | 5.769 | 0.335 | 17.21 | ENSG00000120594 |
MAFB | fibrosarcoma oncogene homolog B (avian) solute carrier family 14 (urea | chr20 | 37.177 | 6.679 | 0.605 | 2.096 | 21.928 | 1.351 | 16.24 | ENSG00000204103 |
SLC14A1 | transporter), member 1 (Kidd blood group | chr18 | 6.188 | 2.096 | 0.360 | 0.177 | 4.142 | 0.269 | 15.41 | ENSG00000141469 |
ADRA2A | adrenergic, alpha-2A-, receptor | chr10 | 4.373 | 10.666 | 0.899 | 0.145 | 7.519 | 0.522 | 14.42 | ENSG00000150594 |
MAN1C1 | mannosidase, alpha, class 1C, member 1 | chr1 | 16.774 | 24.3346 | 0.65654 | 2.7991 | 20.554 | 1.728 | 11.90 | ENSG00000117643 |
CFI | complement factor I solute carrier family 12 | chr4 | 21.803 | 28.7589 | 0.10437 | 4.3263 | 25.281 | 2.215 | 11.41 | ENSG00000205403 |
SLC12A8 | (potassium/chloride transporters), member 8 | chr3 | 7.442 | 15.2539 | 0.62851 | 1.4395 | 11.348 | 1.034 | 10.97 | ENSG00000221955 |
THBS4 | thrombospondin 4 | chr5 | 5.8622 | 7.09226 | 0.05843 | 1.2202 | 6.477 | 0.639 | 10.13 | ENSG00000113296 |
SERPINB2 | serpin peptidase inhibitor, clade B (ovalbumin), member 2 | chr18 | 0.236 | 0.095 | 16.207 | 10.030 | 0.166 | 13.118 | −79.11 | ENSG00000197632 |
AQP1 | aquaporin 1 (Colton blood group) | chr7 | 5.675 | 3.860 | 396.183 | 25.802 | 4.768 | 210.992 | −44.26 | ENSG00000240583 |
APOBEC3B | apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B | chr22 | 0.0775 | 0.23398 | 2.59902 | 7.4102 | 0.156 | 5.005 | −32.13 | ENSG00000179750 |
NEFM | neurofilament, medium polypeptide | chr8 | 0.0592 | 0.07122 | 3.69528 | 0.2014 | 0.065 | 1.948 | −29.87 | ENSG00000104722 |
CCDC3 | coiled-coil domain containing 3 | chr10 | 0.1241 | 0.09255 | 4.48673 | 1.7074 | 0.108 | 3.097 | −28.59 | ENSG00000151468 |
F10 | coagulation factor X | chr13 | 0.197 | 0.21727 | 8.44739 | 2.9581 | 0.207 | 5.703 | −27.53 | ENSG00000126218 |
HHIP | hedgehog interacting protein | chr4 | 0.073 | 0.26532 | 7.88577 | 1.1075 | 0.169 | 4.497 | −26.58 | ENSG00000164161 |
ARL2-SNX15 | - | chr11 | 0.361 | 0.39062 | 8.29552 | 11.168 | 0.376 | 9.732 | −25.90 | - |
HES4 | hairy and enhancer of split 4 | chr1 | 0.3015 | 0.46829 | 16.2396 | 1.0894 | 0.385 | 8.664 | −22.51 | ENSG00000188290 |
GPAT2 | glycerol-3-phosphate acyltransferase 2, mitochondrial | chr2 | 0.5547 | 0.36585 | 17.6005 | 3.0486 | 0.460 | 10.325 | −22.43 | ENSG00000186281 |