Organism | Strain | Pathotype /or others | GenBank Accession /Assembly | GC (%) | Genome Size (~ Mb) |
---|---|---|---|---|---|
Campylobacter upsaliensis | JV21 | pathogenic | ASM18534v1 | NA | 1.6 |
Lactobacillus coleohominis | 101-4-CHN | probiotic | ASM16193v1 | 41.3 | 1.7 |
Campylobacter jejuni | RM1221 | pathogenic | NC_003912.7 | 30.3 | 1.8 |
Lactobacillus johnsonii | FI9785 | probiotic | NC_013504.1 | 34.4 | 1.8 |
Pediococcus pentosaceus | ATCC 25745 | probiotic | CP000422.1 | 37.4 | 1.8 |
Streptococcus thermophilus LMG | LMG 18311 | probiotic | NC_006448.1 | 39.1 | 1.8 |
Lactobacillus gasseri | ATCC 33323 | probiotic | NC_008530.1 | 35.3 | 1.9 |
Lactobacillus sakei subsp. sakei | 23K | probiotic | NC_007576.1 | 41.3 | 1.9 |
Lactobacillus delbrueckii subsp. bulgaricus | ATCC 11842 | probiotic | NC_008054.1 | 49.7 | 1.9 |
Lactobacillus delbrueckii subsp. bulgaricus | ATCC BAA-365 | probiotic | NC_008529.1 | 49.7 | 1.9 |
Leuconostoc citreum | KM20 | probiotic | ASM2640v1 | 38.9 | 1.9 |
Bifidobacterium animalis subsp. Lactis | Bl-04 | probiotic | NC_012814.1 | 60.5 | 1.9 |
Bifidobacterium animalis subsp. Lactis | DSM 10140 | probiotic | NC_012815.1 | 60.5 | 1.9 |
Bifidobacterium animalis subsp. Lactis | AD011 | probiotic | NC_011835.1 | 60.5 | 1.9 |
Lactobacillus amylovorus | GRL1118 | probiotics | ASM19411v1 | 38.0 | 2.0 |
Lactobacillus johnsonii | NCC 533 | probiotic | NC_005362.1 | 34.6 | 2.0 |
Lactobacillus acidophilus | NCFM | probiotic | NC_006814.3 | 34.7 | 2.0 |
Lactobacillus reuteri | DSM 20016 | probiotic | NC_009513.1 | 38.9 | 2.0 |
Lactobacillus reuteri | JCM 1112 | probiotic | NC_010609.1 | 38.9 | 2.0 |
Listeria monocytogenes | FSL J1-208 | pathogenic | ASM16843v1 | 37.7 | 2.0 |
Lactobacillus salivarius | UCC118 | probiotic | NC_007929.1 | 33 | 2.1 |
Lactobacillus helveticus | DPC 4571 | probiotic | NC_010080.1 | 37.1 | 2.1 |
Leuconostoc mesenteroides subsp. mesenteroides | ATCC 8293 | probiotic | NC_008531.1 | 37.7 | 2.1 |
Campylobacter concisus | 13826 | pathogenic | NC_009802.1 | 39.3 | 2.1 |
Lactobacillus fermentum | IFO 3956 | probiotic | NC_010610.1 | 51.5 | 2.1 |
Bifidobacterium adolescentis | ATCC 15703 | probiotic | NC_008618.1 | 59.2 | 2.1 |
Bifidobacterium bifidum | PRL2010 | probiotic | NC_014638.1 | Na | 2.2 |
Bifidobacterium bifidum | S17 | probiotic | NC_014616.1 | Na | 2.2 |
Lactobacillus amylovorus | GRL 1112 | probiotic | NC_014724.1 | Na | 2.2 |
Lactobacillus brevis | ATCC 367 | probiotic | NC_008497.1 | 46.1 | 2.3 |
Lactobacillus crispatus | CTV-05 | probiotic | ASM16588v1 | 37.1 | 2.3 |
Bifidobacterium longum | NCC2705 | probiotic | NC_004307.2 | 60.1 | 2.3 |
Bifidobacterium longum subsp. longum | BBMN68 | probiotic | NC_014656.1 | Na | 2.3 |
Bifidobacterium longum subsp. infantis | 157F | probiotic | NC_015052.1 | Na | 2.4 |
Bifidobacterium longum subsp. longum | JCM 1217 | probiotic | NC_015067.1 | Na | 2.4 |
Lactococcus lactis subsp. lactis | Il1403 | probiotic | NC_002662.1 | 35.3 | 2.4 |
Bifidobacterium longum | DJO10A | probiotic | NC_010816.1 | 60.2 | 2.4 |
Bifidobacterium longum subsp. longum | JDM301 | probiotic | NC_014169.1 | Na | 2.5 |
Lactococcus lactis subsp. cremoris | MG1363 | probiotic | NC_009004.1 | 35.7 | 2.5 |
Listeria grayi | DSM 20601 | pathogenic | ASM14899v1* | 41.6 | 2.6 |
Propionibacterium freudenreichii subsp. shermanii | CIRM-BIA1 | probiotic | NC_014215.1 | Na | 2.6 |
Lactococcus lactis subsp. lactis | KF147 | probiotic | NC_013656.1 | 34.9 | 2.6 |
Lactococcus lactis subsp. cremoris | SK11 | probiotic | NC_008527.1 | 35.8 | 2.6 |
Bifidobacterium dentium | Bd1 | probiotic | NC_013714.1 | 58.5 | 2.6 |
Bifidobacterium longum subsp. infantis | ATCC 15697 | probiotic | NC_011593.1 | 59.9 | 2.8 |
Listeria monocytogenes | EGD-e | pathogenic | NC_003210.1 | 38 | 2.9 |
Lactobacillus casei str. | Zhang | probiotic | NC_014334.1 | 40.1 | 2.9 |
Lactobacillus casei | ATCC 334 | probiotic | NC_008526.1 | 46.6 | 2.9 |
Lactobacillus paracasei subsp. paracasei | ATCC 25302 | probiotic | ASM15949v1 | 46.5 | 2.9 |
Lactobacillus rhamnosus | GG | probiotic | NC_013198.1 | 46.7 | 3.0 |
Lactobacillus rhamnosus | Lc 705 | probiotic | NC_013199.1 | 46.7 | 3.0 |
Lactobacillus casei | BL23 | probiotic | NC_010999.1 | 46.3 | 3.1 |
Lactobacillus plantarum | JDM1 | probiotic | NC_012984.1 | 44.7 | 3.2 |
Enterococcus faecalis | V583 | probiotic | NC_004668.1 | 37.4 | 3.3 |
Lactobacillus plantarum | WCFS1 | probiotic | NC_004567.1 | 44.4 | 3.3 |
Lactobacillus plantarum subsp. plantarum | ST-III | probiotic | NC_014554.1 | Na | 3.4 |
Bacillus selenitireducens | MLS10 | Bio agent | ASM9308v1 | 48.7 | 3.6 |
Bacillus pumilus | SAFR-032 | probiotic | NC_009848.1 | 41.3 | 3.7 |
Coprobacillus sp. | 29_1 | Non-pathogenic | Coprobacillus_sp_29_1_V1 | NA | 3.8 |
Vibrio cholerae | M66-2 | pathogenic | NC_012578.1 | 47.6 | 3.9 |
Bacillus halodurans | C-125 | Non-pathogenic | ASM1114v1 | 43.7 | 4.2 |
Bacillus amyloliquefaciens | Y2 | probiotic | ASM28439v1 | 45.9 | 4.2 |
Clostridium difficile | 630 | pathogenic | NC_009089.1 | 29.1 | 4.3 |
Bacillus clausii | KSM-K16 | probiotic | NC_006582.1 | 44.8 | 4.3 |
Shigella dysenteriae | Sd197 | pathogenic | ASM1200v1] | 50.9 | 4.6 |
Shigella flexneri | 8401 | pathogenic | NC_008258.1 | 50.9 | 4.6 |
Salmonella enterica subsp. arizonae serovar | RSK2980 | pathogenic | NC_010067.1 | 51.4 | 4.6 |
Enterobacter sp. | 638 | pathogenic | NC_009436.1 | 52.9 | 4.7 |
Vibrio vulnificus | CMCP6 | pathogenic | NC_004459.2 | 46.7 | 5.1 |
Escherichia coli | E24377A | pathogenic | NC_009801.1 | 50.6 | 5.2 |
Citrobacter rodentium | ICC168 | pathogenic | NC_013716.1 | 54.6 | 5.4 |
Klebsiella variicola | At-22 | pathogenic | NC_013850.1 | 57.6 | 5.5 |
Bacillus megaterium | QM B1551 | probiotic | ASM2582v1 | 38.0 | 5.5 |
Escherichia coli O157:H7 | Sakai | pathogenic | NC_002695.1 | 50.5 | 5.6 |
Bacillus thuringiensis serovar israelensis | ATCC 35646 | Bio agents | ASM16769v1 | 35.0 | 5.9 |
Lachnospiraceae bacterium | 3_1_57FAA_CT1 | Non-pathogenic | Lach_bact_3_1_57FAA_CT1_V1 | NA | 7.7 |