Table 2 Proteins that recovered their nuclear locations in response to oxygen in a shorter time period
From: The nuclear localization of SWI/SNF proteins is subjected to oxygen regulation
ORF name | Gene name | Description |
|---|---|---|
YBR236C | ABD1 | Methyltransferase |
YPR180W | AOS1 | Smt3p (SUMO) activator |
YJL115W | ASF1 | Nucleosome assembly factor |
YNR010W | CSE2 | Subunit of the RNA polymerase II mediator complex |
YIL036W | CST6 | Member of the ATF/CREB family |
YJL006C | CTK2 | Beta subunit of C-terminal domain kinase I |
YEL018W | EAF5 | Subunit of the NuA4 acetyltransferase complex |
YMR277W | FCP1 | Carboxy-terminal domain (CTD) phosphatase |
YCL011C | GBP2 | Poly(A+) RNA-binding protein |
YGR252W | GCN5 | Subunit of the ADA and SAGA complexes |
YDR096W | GIS1 | JmjC domain-containing histone demethylase |
YDR174W | HMO1 | Chromatin associated high mobility group family member |
YFL013C | IES1 | Subunit of the INO80 chromatin remodeling complex |
YHR085W | IPI1 | Essential component of the Rix1 complex |
YIL026C | IRR1 | Subunit of the cohesin complex |
YDL108W | KIN28 | Subunit of the transcription factor TFIIH |
YDL087C | LUC7 | Associated with the U1 snRNP complex |
YMR043W | MCM1 | Involved in cell-type-specific transcription |
YDL005C | MED2 | Subunit of the RNA polymerase II mediator complex |
YMR070W | MOT3 | Nuclear transcription factor mediating hypoxia response |
YKL059C | MPE1 | Essential conserved subunit of CPF |
YNR024W | MPP6 | Nuclear RNA binding protein |
YLR116W | MSL5 | Component of the commitment complex |
YPR144C | NOC4 | Mediating maturation and nuclear export of 40S |
YHR133C | NSG1 | Regulator of sterol biosynthesis |
YKR082W | NUP133 | Subunit of the nuclear pore complex |
YAR002W | NUP60 | Subunit of the nuclear pore complex |
YJL061W | NUP82 | Nucleoporin, subunit of the nuclear pore complex (NPC) |
YOL115W | PAP2 | Catalytic subunit of TRAMP |
YDR228C | PCF11 | mRNA 3' end processing factor |
YMR076C | PDS5 | Required for sister chromatid condensation and cohesion |
YNL282W | POP3 | Subunit of both RNase MRP |
YGR030C | POP6 | Subunit of both RNase MRP |
YBL018C | POP8 | Subunit of both RNase MRP |
YLL036C | PRP19 | Splicing factor associated with the spliceosome |
YGR156W | PTI1 | Pta1p Interacting protein |
YKL113C | RAD27 | 5' to 3' exonuclease, 5' flap endonuclease |
YGL246C | RAI1 | Required for pre-rRNA processing |
YNL216W | RAP1 | Involved in either activation or repression of transcription |
YDR195W | REF2 | RNA-binding protein |
YAR007C | RFA1 | Subunit of heterotrimeric Replication Protein A |
YNL290W | RFC3 | Subunit of heteropentameric Replication factor C |
YOL094C | RFC4 | Subunit of heteropentameric Replication factor C |
YHR197W | RIX1 | Essential component of the Rix1 complex |
YMR061W | RNA14 | Cleavage and polyadenylation factor I (CF I) component |
YJL011C | RPC17 | RNA polymerase III subunit C17 |
YER117W | RPL23B | Component of the large (60S) ribosomal subunit |
YDR427W | RPN9 | Non-ATPase regulatory subunit of the 26S proteasome |
YHR062C | RPP1 | Subunit of both RNase MRP |
YBR095C | RXT2 | Subunit of the histone deacetylase Rpd3L complex |
YIL084C | SDS3 | Component of the Rpd3p/Sin3p deacetylase complex |
YJL168C | SET2 | Histone methyltransferase |
YIL104C | SHQ1 | Required for the assembly of box H/ACA snoRNPs |
YHR206W | SKN7 | Regulator of heat-shock genes |
YGR074W | SMD1 | Core Sm protein Sm D1 |
YHL025W | SNF6 | Subunit of the SWI/SNF chromatin remodeling complex |
YMR016C | SOK2 | Involved in the cAMP-dependent protein kinase signaling |
YBR152W | SPP381 | mRNA splicing factor |
YER161C | SPT2 | Involved in negative regulation of transcription |
YDR392W | SPT3 | Subunit of the SAGA and SAGA-like complexes |
YIL143C | SSL2 | Component of RNA polymerase transcription factor TFIIH |
YBR231C | SWC5 | Component of the SWR1 complex |
YJL176C | SWI3 | Subunit of the SWI/SNF chromatin remodeling complex |
YFL049W | SWP82 | Subunit of the SWI/SNF chromatin remodeling complex |
YGR129W | SYF2 | Component of the spliceosome complex |
YGR274C | TAF1 | TFIID subunit (145 kDa) |
YGL112C | TAF6 | Subunit (60 kDa) of TFIID and SAGA complexes |
YDR311W | TFB1 | Subunit of TFIIH and nucleotide excision repair factor complexes |
YPL203W | TPK2 | cAMP-dependent protein kinase catalytic subunit |
YDR165W | TRM82 | Subunit of a tRNA methyltransferase complex |
YNL246W | VPS75 | NAP family histone chaperone |
YOR229W | WTM2 | Regulator of meiosis, silencing, and expression of RNR genes |
YHR090C | YNG2 | Subunit of the NuA4 histone acetyltransferase complex |
YIL063C | YRB2 | Involved in nuclear processes of the Ran-GTPase cycle |
YGR270W | YTA7 | Regulator of histone gene expression |
YPR107C | YTH1 | Component of cleavage and polyadenylation factor |