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Table 2 List of protein families recovered from screen colonies

From: Systematic analysis of secreted proteins reveals synergism between IL6 and other proteins in soft agar growth of MCF10A cells

total inserts Total colonies % of all colonies Protein family  
97 83 27.9% Interleukin Interleukin
97 88 29.5% WFDC WAP Four-Disulfide Core Domain
78 72 24.2% FGF Fibroblast Growth Factor
54 54 18.1% Wnt Wingless-type MMTV Integration Site Family
40 39 13.1% PON Paraoxonase
35 34 11.4% KLK Kalikrein
33 28 9.4% TGFB Transforming Growth Factor
21 19 6.4% CXCL CXC Chemokine Ligand
21 21 7.0% DEF Defensin
21 21 7.0% FGFBP Fibroblast Growth Factor Binding Protein
26 26 8.7% TIMP Tissue Inhibitor of Metalloproteinase
19 19 6.4% CCL CC Chemokine Ligand
19 19 6.4% IGFBP Insulin-like Growth Factor Binding Protein
18 18 6.0% RSPO R-Spondin
16 15 5.0% DKK Dickkopf
15 15 5.0% SAA Serum Amyloid
14 14 4.7% PTHLH Parathyroid Hormone-Like Hormone
14 14 4.7% SFTP Surfactant Protein
14 14 4.7% WISP Connective Tissue Growth Factor
13 13 4.4% APO Apolipoprotein
13 13 4.4% Ly-6 Ly6/uPAR
13 13 4.4% PGLYRP Peptidoglycan Recognition Protein
12 12 4.0% MASP MBL-associated Serine Protease
10 10 3.4% FAM3 Family with Sequence Similarity 3
10 10 3.4% IFN Interferon
10 10 3.4% SPARC Secreted Protein Acidic and Rich in Cysteine
10 10 3.4% SUMF Sulfatase Modifying Factor
  1. The DNA recovered from the screen colonies was grouped in protein families, and the most prevalent protein families are listed here. As multiple protein family members may co-occur in a single colony, the number of colonies may be less than the number of inserts where the protein family is represented. Proteins that have no family members in this screen are listed as individual proteins
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